Description: Use Debian packaged libraries
Author: Michael R. Crusoe <michael.crusoe@gmail.com>

--- khmer.orig/setup.cfg
+++ khmer/setup.cfg
@@ -7,10 +7,10 @@
 [build_ext]
 define = SEQAN_HAS_BZIP2,SEQAN_HAS_ZLIB
 undef = NO_UNIQUE_RC
-# libraries = z,bz2
+libraries = z,bz2
 ## if using system libraries
-include-dirs = lib:third-party/zlib:third-party/bzip2:third-party/seqan/core/include:third-party/smhasher
-# include-dirs = lib
+#include-dirs = lib:third-party/zlib:third-party/bzip2:third-party/seqan/core/include:third-party/smhasher
+include-dirs = lib:third-party/seqan/core/include:third-party/smhasher
 ## if using system libraries (broken)
 
 # define = NDEBUG
