sample	chr	startpos	endpos	nMajor	nMinor
TCGA-MB-A8JK	1	61735	78829867	2	2
TCGA-MB-A8JK	1	78830587	83748488	3	2
TCGA-MB-A8JK	1	83748726	101494435	2	2
TCGA-MB-A8JK	1	101497326	107629681	3	2
TCGA-MB-A8JK	1	107630997	121741181	2	2
TCGA-MB-A8JK	1	143285278	182466539	5	2
TCGA-MB-A8JK	1	182468835	248008274	2	0
TCGA-MB-A8JK	1	248010151	248930189	0	0
TCGA-MB-A8JK	2	12784	13131770	2	1
TCGA-MB-A8JK	2	13132010	27177965	2	0
TCGA-MB-A8JK	2	27181483	32167974	2	2
TCGA-MB-A8JK	2	32168007	58391854	2	1
TCGA-MB-A8JK	2	58392003	58759109	2	0
TCGA-MB-A8JK	2	58760591	110653621	2	2
TCGA-MB-A8JK	2	110661171	111283948	3	2
TCGA-MB-A8JK	2	111293306	124271238	2	1
TCGA-MB-A8JK	2	124271570	125354575	6	3
TCGA-MB-A8JK	2	125357227	136827512	3	2
TCGA-MB-A8JK	2	136828566	140034175	4	2
TCGA-MB-A8JK	2	140034188	140832671	7	2
TCGA-MB-A8JK	2	140834029	163470850	2	2
TCGA-MB-A8JK	2	163471078	167483561	2	1
TCGA-MB-A8JK	2	167483916	168159950	3	2
TCGA-MB-A8JK	2	168163448	171785547	2	2
TCGA-MB-A8JK	2	171790212	175458050	2	1
TCGA-MB-A8JK	2	175461946	180578972	1	1
TCGA-MB-A8JK	2	180580188	242147305	2	1
TCGA-MB-A8JK	3	18667	975724	3	2
TCGA-MB-A8JK	3	976585	6522975	3	3
TCGA-MB-A8JK	3	6523722	11014600	5	2
TCGA-MB-A8JK	3	11015145	30945155	2	1
TCGA-MB-A8JK	3	30946248	33493661	3	2
TCGA-MB-A8JK	3	33493919	93800634	2	1
TCGA-MB-A8JK	3	93801172	117882149	2	0
TCGA-MB-A8JK	3	117883599	118385481	3	2
TCGA-MB-A8JK	3	118385883	121246564	2	0
TCGA-MB-A8JK	3	121248036	121748151	2	1
TCGA-MB-A8JK	3	121758787	126296691	2	0
TCGA-MB-A8JK	3	126296824	126677557	2	2
TCGA-MB-A8JK	3	126682585	148694813	2	0
TCGA-MB-A8JK	3	148695132	149182006	2	1
TCGA-MB-A8JK	3	149182259	174569276	2	0
TCGA-MB-A8JK	3	174569624	174962519	2	1
TCGA-MB-A8JK	3	174963457	198169247	2	0
TCGA-MB-A8JK	4	12281	49059124	2	1
TCGA-MB-A8JK	4	49059192	181209068	2	2
TCGA-MB-A8JK	4	181213056	187602891	1	0
TCGA-MB-A8JK	4	187604629	190106768	2	0
TCGA-MB-A8JK	5	15532	588360	1	0
TCGA-MB-A8JK	5	590595	11625194	2	0
TCGA-MB-A8JK	5	11627958	15690346	2	1
TCGA-MB-A8JK	5	15694297	21266912	2	0
TCGA-MB-A8JK	5	21268868	22770448	3	0
TCGA-MB-A8JK	5	22770810	23610465	2	0
TCGA-MB-A8JK	5	23610481	28917986	1	0
TCGA-MB-A8JK	5	28920321	41812565	2	0
TCGA-MB-A8JK	5	41815018	44201111	3	0
TCGA-MB-A8JK	5	44201913	44571042	2	0
TCGA-MB-A8JK	5	44571929	46334235	1	0
TCGA-MB-A8JK	5	46334777	181363319	2	1
TCGA-MB-A8JK	6	149661	60395828	3	1
TCGA-MB-A8JK	6	60398292	63255960	5	4
TCGA-MB-A8JK	6	63256844	170741917	3	1
TCGA-MB-A8JK	7	43259	7106212	3	1
TCGA-MB-A8JK	7	7110370	10842200	1	1
TCGA-MB-A8JK	7	10842707	22307732	2	1
TCGA-MB-A8JK	7	22313089	22590386	3	2
TCGA-MB-A8JK	7	22591561	26967872	2	1
TCGA-MB-A8JK	7	26968406	29577262	2	2
TCGA-MB-A8JK	7	29586579	56430945	2	1
TCGA-MB-A8JK	7	56432874	57224283	3	1
TCGA-MB-A8JK	7	57224899	83984646	2	1
TCGA-MB-A8JK	7	83984741	84141032	1	1
TCGA-MB-A8JK	7	84142196	159334314	2	1
TCGA-MB-A8JK	8	81254	413762	1	0
TCGA-MB-A8JK	8	418012	3332574	2	0
TCGA-MB-A8JK	8	3335249	3625109	1	0
TCGA-MB-A8JK	8	3630124	125120469	2	0
TCGA-MB-A8JK	8	125120574	132306100	2	2
TCGA-MB-A8JK	8	132309126	133269531	2	0
TCGA-MB-A8JK	8	133270203	134664596	2	2
TCGA-MB-A8JK	8	134666561	134888111	2	0
TCGA-MB-A8JK	8	134889048	136152753	3	2
TCGA-MB-A8JK	8	136152832	138739059	2	0
TCGA-MB-A8JK	8	138745810	145072769	2	2
TCGA-MB-A8JK	9	46587	28359981	3	2
TCGA-MB-A8JK	9	28360376	117285620	2	2
TCGA-MB-A8JK	9	117285743	119394492	3	2
TCGA-MB-A8JK	9	119398829	138200944	2	2
TCGA-MB-A8JK	10	26823	832955	4	2
TCGA-MB-A8JK	10	833591	16341772	3	2
TCGA-MB-A8JK	10	16341932	18694253	2	1
TCGA-MB-A8JK	10	18695642	20319985	3	2
TCGA-MB-A8JK	10	20320376	37507395	2	2
TCGA-MB-A8JK	10	37508233	43485944	4	1
TCGA-MB-A8JK	10	43489017	46049936	3	1
TCGA-MB-A8JK	10	46050528	46606238	1	1
TCGA-MB-A8JK	10	46617420	47680348	1	0
TCGA-MB-A8JK	10	47684535	48679217	1	1
TCGA-MB-A8JK	10	48679494	56449696	1	0
TCGA-MB-A8JK	10	56455517	66850251	1	1
TCGA-MB-A8JK	10	66853593	69985791	1	0
TCGA-MB-A8JK	10	69989206	70719893	1	1
TCGA-MB-A8JK	10	70720823	72913629	1	0
TCGA-MB-A8JK	10	72914257	133769379	1	1
TCGA-MB-A8JK	11	198572	29368638	2	1
TCGA-MB-A8JK	11	29368769	31383212	1	0
TCGA-MB-A8JK	11	31385376	31404997	2	2
TCGA-MB-A8JK	11	31404997	33280928	1	0
TCGA-MB-A8JK	11	33291834	39171916	2	1
TCGA-MB-A8JK	11	39172462	50561088	1	0
TCGA-MB-A8JK	11	50564719	64740283	2	1
TCGA-MB-A8JK	11	64740681	66720062	2	2
TCGA-MB-A8JK	11	66725823	91239010	2	1
TCGA-MB-A8JK	11	91240605	135074876	1	1
TCGA-MB-A8JK	12	51460	1236883	9	1
TCGA-MB-A8JK	12	1241062	4678655	4	1
TCGA-MB-A8JK	12	4679200	7927612	2	1
TCGA-MB-A8JK	12	7927704	8653313	6	1
TCGA-MB-A8JK	12	8658024	11520094	2	1
TCGA-MB-A8JK	12	11520212	12161075	4	1
TCGA-MB-A8JK	12	12161874	13255034	2	1
TCGA-MB-A8JK	12	13257207	13774776	7	1
TCGA-MB-A8JK	12	13774962	19128483	5	1
TCGA-MB-A8JK	12	19134904	23970728	2	1
TCGA-MB-A8JK	12	23971811	25210093	3	1
TCGA-MB-A8JK	12	25213573	33150720	1	1
TCGA-MB-A8JK	12	33150932	34328601	1	0
TCGA-MB-A8JK	12	34329965	122180775	1	1
TCGA-MB-A8JK	12	122186925	123284802	2	1
TCGA-MB-A8JK	12	123290580	133201603	1	1
TCGA-MB-A8JK	13	18452809	20277380	2	2
TCGA-MB-A8JK	13	20280022	20953532	2	0
TCGA-MB-A8JK	13	20953623	23445207	3	2
TCGA-MB-A8JK	13	23447557	23883741	2	0
TCGA-MB-A8JK	13	23884950	32694376	3	2
TCGA-MB-A8JK	13	32694436	33498061	3	0
TCGA-MB-A8JK	13	33504514	36912084	4	3
TCGA-MB-A8JK	13	36916086	47013498	3	0
TCGA-MB-A8JK	13	47015219	47463205	0	0
TCGA-MB-A8JK	13	47465838	48156191	2	0
TCGA-MB-A8JK	13	48156333	48157367	1	0
TCGA-MB-A8JK	13	48158974	48229591	2	0
TCGA-MB-A8JK	13	48232374	48737943	0	0
TCGA-MB-A8JK	13	48738481	48747328	3	0
TCGA-MB-A8JK	13	48748032	48748400	2	0
TCGA-MB-A8JK	13	48748721	108962849	3	0
TCGA-MB-A8JK	13	108967476	109144370	0	0
TCGA-MB-A8JK	13	109144444	114342922	2	0
TCGA-MB-A8JK	14	18225647	106877229	2	1
TCGA-MB-A8JK	15	19811075	25191032	2	1
TCGA-MB-A8JK	15	25191042	42143804	1	1
TCGA-MB-A8JK	15	42143845	73168085	2	1
TCGA-MB-A8JK	15	73173626	73626039	1	0
TCGA-MB-A8JK	15	73629655	83753011	2	1
TCGA-MB-A8JK	15	83753754	84928050	3	2
TCGA-MB-A8JK	15	84933210	85681339	4	2
TCGA-MB-A8JK	15	85681355	90467950	2	2
TCGA-MB-A8JK	15	90468030	95132959	3	2
TCGA-MB-A8JK	15	95132991	98187174	4	2
TCGA-MB-A8JK	15	98187546	101928837	3	2
TCGA-MB-A8JK	16	10777	36048855	2	1
TCGA-MB-A8JK	16	46429870	50426785	2	0
TCGA-MB-A8JK	16	50427140	51614396	2	1
TCGA-MB-A8JK	16	51621168	62122243	2	0
TCGA-MB-A8JK	16	62124421	90221127	2	1
TCGA-MB-A8JK	17	150733	7877743	2	0
TCGA-MB-A8JK	17	7877766	9693978	3	0
TCGA-MB-A8JK	17	9694199	9713954	1	0
TCGA-MB-A8JK	17	9715066	9837768	0	0
TCGA-MB-A8JK	17	9837923	10468944	3	0
TCGA-MB-A8JK	17	10473827	10638424	0	0
TCGA-MB-A8JK	17	10640776	16952296	2	0
TCGA-MB-A8JK	17	16953103	20948707	5	0
TCGA-MB-A8JK	17	20948733	26960035	7	0
TCGA-MB-A8JK	17	26970127	35965931	2	0
TCGA-MB-A8JK	17	35965944	36567250	3	0
TCGA-MB-A8JK	17	36575991	55337313	2	2
TCGA-MB-A8JK	17	55338489	71165528	2	0
TCGA-MB-A8JK	17	71168721	71657413	2	2
TCGA-MB-A8JK	17	71657657	79085068	3	2
TCGA-MB-A8JK	17	79088192	83090856	3	0
TCGA-MB-A8JK	18	48133	705695	4	1
TCGA-MB-A8JK	18	706047	14084501	2	1
TCGA-MB-A8JK	18	14084501	15402409	2	2
TCGA-MB-A8JK	18	20949392	24449415	3	2
TCGA-MB-A8JK	18	24449611	80257174	2	0
TCGA-MB-A8JK	19	90910	1107036	4	1
TCGA-MB-A8JK	19	1107161	4844140	2	1
TCGA-MB-A8JK	19	4844193	5705064	3	1
TCGA-MB-A8JK	19	5713224	7266983	4	1
TCGA-MB-A8JK	19	7271105	12853365	3	1
TCGA-MB-A8JK	19	12854882	14398750	4	4
TCGA-MB-A8JK	19	14402969	19707671	2	2
TCGA-MB-A8JK	19	19712387	20669090	3	3
TCGA-MB-A8JK	19	20669496	22049522	3	2
TCGA-MB-A8JK	19	22053417	24281296	2	1
TCGA-MB-A8JK	19	24281335	30866902	3	2
TCGA-MB-A8JK	19	30867699	58586487	2	1
TCGA-MB-A8JK	20	80664	18737080	2	0
TCGA-MB-A8JK	20	18738729	30254921	2	1
TCGA-MB-A8JK	20	30256161	41162364	2	0
TCGA-MB-A8JK	20	41168825	43321623	2	1
TCGA-MB-A8JK	20	43321948	43952800	4	2
TCGA-MB-A8JK	20	43954383	49128410	2	1
TCGA-MB-A8JK	20	49129250	52396425	3	2
TCGA-MB-A8JK	20	52396909	55681571	2	2
TCGA-MB-A8JK	20	55682392	55729234	3	3
TCGA-MB-A8JK	20	55731107	59631263	2	2
TCGA-MB-A8JK	20	59631654	63439613	2	1
TCGA-MB-A8JK	20	63459200	64324800	1	1
TCGA-MB-A8JK	21	10336543	22510560	2	1
TCGA-MB-A8JK	21	22513795	37597731	3	2
TCGA-MB-A8JK	21	37600108	40072923	2	1
TCGA-MB-A8JK	21	40073407	42099575	3	1
TCGA-MB-A8JK	21	42102088	44259347	1	1
TCGA-MB-A8JK	21	44259375	46677045	1	0
TCGA-MB-A8JK	22	15294545	50796027	2	1
TCGA-MB-A8JK	X	251810	2785350	3	1
TCGA-MB-A8JK	X	2785592	5601983	1	0
TCGA-MB-A8JK	X	5602301	15253849	2	0
TCGA-MB-A8JK	X	15259545	20071702	3	0
TCGA-MB-A8JK	X	20073495	155699837	2	0
TCGA-MB-A8JK	X	155733777	156004181	2	1
